wise2-2.2.0-1.220.x86_64.rpm


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Description

wise2 - Advanced Comparison of Protein Sequence to Genomic DNA Sequence

Property Value
Distribution openSUSE Tumbleweed
Repository Science all
Package name wise2
Package version 2.2.0
Package release 1.220
Package architecture x86_64
Package type rpm
Installed size 7.32 MB
Download size 703.94 KB
Official Mirror widehat.opensuse.org
Wise2 is a package focused on comparisons of bio polymers, commonly DNA
sequence and protein sequence.

Alternatives

Package Version Architecture Repository
wise2-2.2.0-1.220.i586.rpm 2.2.0 i586 Science
wise2 - - -

Requires

Name Value
libc.so.6(GLIBC_2.14)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -

Provides

Name Value
config(wise2) = 2.2.0-1.220
wise2 = 2.2.0-1.220
wise2(x86-64) = 2.2.0-1.220

Download

Type URL
Binary Package wise2-2.2.0-1.220.x86_64.rpm
Source Package wise2-2.2.0-1.220.src.rpm

Install Howto

  1. Add the Science repository:
    # zypper addrepo http://widehat.opensuse.org/opensuse/repositories/science/openSUSE_Tumbleweed/ science
  2. Install wise2 rpm package:
    # zypper install wise2

Files

Path
/etc/profile.d/wise2.csh
/etc/profile.d/wise2.sh
/usr/bin/dba
/usr/bin/dnal
/usr/bin/estwise
/usr/bin/estwisedb
/usr/bin/genewise
/usr/bin/genewisedb
/usr/bin/genomewise
/usr/bin/psw
/usr/bin/pswdb
/usr/share/doc/packages/wise2/INSTALL
/usr/share/doc/packages/wise2/LICENSE
/usr/share/doc/packages/wise2/README
/usr/share/doc/packages/wise2/docs/README
/usr/share/doc/packages/wise2/docs/apiend.tex
/usr/share/doc/packages/wise2/docs/appendix.tex
/usr/share/doc/packages/wise2/docs/dynamite.tex
/usr/share/doc/packages/wise2/docs/genewise21.eps
/usr/share/doc/packages/wise2/docs/genewise6.eps
/usr/share/doc/packages/wise2/docs/gettex.pl
/usr/share/doc/packages/wise2/docs/makefile
/usr/share/doc/packages/wise2/docs/wise2.tex
/usr/share/doc/packages/wise2/docs/wise2api.tex
/usr/share/doc/packages/wise2/docs/wise3arch.tex
/usr/share/wise2/
/usr/share/wise2/test_data/README
/usr/share/wise2/test_data/db.hmm
/usr/share/wise2/test_data/hn_est.fa
/usr/share/wise2/test_data/human.genomic
/usr/share/wise2/test_data/keratin_intron.human
/usr/share/wise2/test_data/keratin_intron.mouse
/usr/share/wise2/test_data/pep.fa
/usr/share/wise2/test_data/road.pep
/usr/share/wise2/test_data/rrm.HMM
/usr/share/wise2/test_data/vav.dna
/usr/share/wise2/test_data/xeno.cdna
/usr/share/wise2/test_data/xeno.pep
/usr/share/wise2/wisecfg/BLOSUM30.bla
/usr/share/wise2/wisecfg/BLOSUM45.bla
/usr/share/wise2/wisecfg/BLOSUM62.bla
/usr/share/wise2/wisecfg/BLOSUM80.bla
/usr/share/wise2/wisecfg/aa.rnd
/usr/share/wise2/wisecfg/blosum30.bla
/usr/share/wise2/wisecfg/blosum62.bla
/usr/share/wise2/wisecfg/cb.tmf
/usr/share/wise2/wisecfg/codon.table
/usr/share/wise2/wisecfg/gene.stat
/usr/share/wise2/wisecfg/gon120.bla
/usr/share/wise2/wisecfg/gon160.bla
/usr/share/wise2/wisecfg/gon200.bla
/usr/share/wise2/wisecfg/gon250.bla
/usr/share/wise2/wisecfg/gon350.bla
/usr/share/wise2/wisecfg/human.gf
/usr/share/wise2/wisecfg/human.gp
/usr/share/wise2/wisecfg/human.stats
/usr/share/wise2/wisecfg/idenity.bla
/usr/share/wise2/wisecfg/methods
/usr/share/wise2/wisecfg/pb.gf
/usr/share/wise2/wisecfg/pombe.gf
/usr/share/wise2/wisecfg/tm.pri
/usr/share/wise2/wisecfg/wise.2
/usr/share/wise2/wisecfg/wise.per
/usr/share/wise2/wisecfg/worm.gf

Changelog

2011-04-24 - Vimalkumar Velayudhan <vimalkumar_v@bioinformatics.org> 2.2.0-2
- Minor changes to spec file
2009-12-18 - Vimalkumar Velayudhan <vimalkumar_v@bioinformatics.org> 2.2.0-1
- Initial package created

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