wise2-2.2.0-1.220.i586.rpm


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Description

wise2 - Advanced Comparison of Protein Sequence to Genomic DNA Sequence

Property Value
Distribution openSUSE Tumbleweed
Repository Science all
Package name wise2
Package version 2.2.0
Package release 1.220
Package architecture i586
Package type rpm
Installed size 8.00 MB
Download size 780.43 KB
Official Mirror widehat.opensuse.org
Wise2 is a package focused on comparisons of bio polymers, commonly DNA
sequence and protein sequence.

Alternatives

Package Version Architecture Repository
wise2-2.2.0-1.220.x86_64.rpm 2.2.0 x86_64 Science
wise2 - - -

Requires

Name Value
libc.so.6(GLIBC_2.7) -
libm.so.6 -
libm.so.6(GLIBC_2.0) -

Provides

Name Value
config(wise2) = 2.2.0-1.220
wise2 = 2.2.0-1.220
wise2(x86-32) = 2.2.0-1.220

Download

Type URL
Binary Package wise2-2.2.0-1.220.i586.rpm
Source Package wise2-2.2.0-1.220.src.rpm

Install Howto

  1. Add the Science repository:
    # zypper addrepo http://widehat.opensuse.org/opensuse/repositories/science/openSUSE_Tumbleweed/ science
  2. Install wise2 rpm package:
    # zypper install wise2

Files

Path
/etc/profile.d/wise2.csh
/etc/profile.d/wise2.sh
/usr/bin/dba
/usr/bin/dnal
/usr/bin/estwise
/usr/bin/estwisedb
/usr/bin/genewise
/usr/bin/genewisedb
/usr/bin/genomewise
/usr/bin/psw
/usr/bin/pswdb
/usr/share/doc/packages/wise2/INSTALL
/usr/share/doc/packages/wise2/LICENSE
/usr/share/doc/packages/wise2/README
/usr/share/doc/packages/wise2/docs/README
/usr/share/doc/packages/wise2/docs/apiend.tex
/usr/share/doc/packages/wise2/docs/appendix.tex
/usr/share/doc/packages/wise2/docs/dynamite.tex
/usr/share/doc/packages/wise2/docs/genewise21.eps
/usr/share/doc/packages/wise2/docs/genewise6.eps
/usr/share/doc/packages/wise2/docs/gettex.pl
/usr/share/doc/packages/wise2/docs/makefile
/usr/share/doc/packages/wise2/docs/wise2.tex
/usr/share/doc/packages/wise2/docs/wise2api.tex
/usr/share/doc/packages/wise2/docs/wise3arch.tex
/usr/share/wise2/
/usr/share/wise2/test_data/README
/usr/share/wise2/test_data/db.hmm
/usr/share/wise2/test_data/hn_est.fa
/usr/share/wise2/test_data/human.genomic
/usr/share/wise2/test_data/keratin_intron.human
/usr/share/wise2/test_data/keratin_intron.mouse
/usr/share/wise2/test_data/pep.fa
/usr/share/wise2/test_data/road.pep
/usr/share/wise2/test_data/rrm.HMM
/usr/share/wise2/test_data/vav.dna
/usr/share/wise2/test_data/xeno.cdna
/usr/share/wise2/test_data/xeno.pep
/usr/share/wise2/wisecfg/BLOSUM30.bla
/usr/share/wise2/wisecfg/BLOSUM45.bla
/usr/share/wise2/wisecfg/BLOSUM62.bla
/usr/share/wise2/wisecfg/BLOSUM80.bla
/usr/share/wise2/wisecfg/aa.rnd
/usr/share/wise2/wisecfg/blosum30.bla
/usr/share/wise2/wisecfg/blosum62.bla
/usr/share/wise2/wisecfg/cb.tmf
/usr/share/wise2/wisecfg/codon.table
/usr/share/wise2/wisecfg/gene.stat
/usr/share/wise2/wisecfg/gon120.bla
/usr/share/wise2/wisecfg/gon160.bla
/usr/share/wise2/wisecfg/gon200.bla
/usr/share/wise2/wisecfg/gon250.bla
/usr/share/wise2/wisecfg/gon350.bla
/usr/share/wise2/wisecfg/human.gf
/usr/share/wise2/wisecfg/human.gp
/usr/share/wise2/wisecfg/human.stats
/usr/share/wise2/wisecfg/idenity.bla
/usr/share/wise2/wisecfg/methods
/usr/share/wise2/wisecfg/pb.gf
/usr/share/wise2/wisecfg/pombe.gf
/usr/share/wise2/wisecfg/tm.pri
/usr/share/wise2/wisecfg/wise.2
/usr/share/wise2/wisecfg/wise.per
/usr/share/wise2/wisecfg/worm.gf

Changelog

2011-04-24 - Vimalkumar Velayudhan <vimalkumar_v@bioinformatics.org> 2.2.0-2
- Minor changes to spec file
2009-12-18 - Vimalkumar Velayudhan <vimalkumar_v@bioinformatics.org> 2.2.0-1
- Initial package created

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xrootd-ceph-devel-4.8.5-51.1.x86_64.rpm Ceph back-end plug-in for XRootD
xrootd-client-4.8.5-51.1.x86_64.rpm XRootD command line client tools
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