prank-100802-1.25.x86_64.rpm


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Description

prank - Probabilistic Alignment Kit

Property Value
Distribution openSUSE Tumbleweed
Repository Science all
Package name prank
Package version 100802
Package release 1.25
Package architecture x86_64
Package type rpm
Installed size 883.95 KB
Download size 278.73 KB
Official Mirror widehat.opensuse.org
PRANK is a command-line program that contains the latest features and the
complete set of options. It is ideal for scripting and non-interactive work,
and as it supports the MSAML-formatted output, the resulting alignments can
always be browsed using the graphical front-end in PRANKSTER
PRANK is developed on Linux but works also on MacOSX and Windows
Citation:
Loytynoja A, Goldman N. 2005. An algorithm for progressive multiple alignment
of sequences with insertions. PNAS 102:10557-10562

Alternatives

Package Version Architecture Repository
prank-100802-1.25.i586.rpm 100802 i586 Science
prank - - -

Requires

Name Value
libc.so.6(GLIBC_2.14)(64bit) -
libgcc_s.so.1()(64bit) -
libgcc_s.so.1(GCC_3.0)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -
libstdc++.so.6()(64bit) -
libstdc++.so.6(CXXABI_1.3)(64bit) -
libstdc++.so.6(GLIBCXX_3.4)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.11)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.15)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.20)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.21)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.9)(64bit) -

Provides

Name Value
prank = 100802-1.25
prank(x86-64) = 100802-1.25

Download

Type URL
Binary Package prank-100802-1.25.x86_64.rpm
Source Package prank-100802-1.25.src.rpm

Install Howto

  1. Add the Science repository:
    # zypper addrepo http://widehat.opensuse.org/opensuse/repositories/science/openSUSE_Tumbleweed/ science
  2. Install prank rpm package:
    # zypper install prank

Files

Path
/usr/bin/prank

Changelog

2011-04-24 - Vimalkumar Velayudhan <vimalkumar_v@bioinformatics.org> 1-2
- Updated version to 100802
- Added patch for RPM_OPT_FLAGS
2009-12-17 - vimalkumar_v@bioinformatics.org
- Initial package created

See Also

Package Description
primme-devel-1.1-1.85.i586.rpm Development and header files for primme
primme-devel-1.1-1.85.x86_64.rpm Development and header files for primme
primme-openmpi-devel-1.1-1.85.i586.rpm Development and header files for primme
primme-openmpi-devel-1.1-1.85.x86_64.rpm Development and header files for primme
probcons-1.12-3.64.i586.rpm Multiple Alignments of Protein Sequences
probcons-1.12-3.64.x86_64.rpm Multiple Alignments of Protein Sequences
pronsole-2.0.0~rc5.1522069560.e0ee40a-16.2.noarch.rpm CLI interface for RepRap
pronterface-2.0.0~rc5.1522069560.e0ee40a-16.2.noarch.rpm GUI interface for RepRap
psurface-2.0.0-3.9.i586.rpm A C++ library that handles piecewise linear bijections between surfaces
psurface-2.0.0-3.9.x86_64.rpm A C++ library that handles piecewise linear bijections between surfaces
psurface-devel-2.0.0-3.9.i586.rpm Development and header files for psurface
psurface-devel-2.0.0-3.9.x86_64.rpm Development and header files for psurface
ptscotch-gnu-mvapich2-hpc-6.0.6-2.1.noarch.rpm Dependency package for ptscotch_6_0_6-gnu-mvapich2-hpc
ptscotch-gnu-openmpi1-hpc-6.0.6-2.1.noarch.rpm Dependency package for ptscotch_6_0_6-gnu-openmpi1-hpc
ptscotch-gnu-openmpi2-hpc-6.0.6-2.1.noarch.rpm Dependency package for ptscotch_6_0_6-gnu-openmpi2-hpc
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