probcons-1.12-lp150.3.10.x86_64.rpm


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Description

probcons - Multiple Alignments of Protein Sequences

Property Value
Distribution openSUSE Leap 15.0
Repository Science all
Package filename probcons-1.12-lp150.3.10.x86_64.rpm
Package name probcons
Package version 1.12
Package release lp150.3.10
Package architecture x86_64
Package type rpm
Category Productivity/Scientific/Other
Homepage http://probcons.stanford.edu
License Public Domain
Maintainer -
Download size 122.08 KB
Installed size 330.46 KB
PROBCONS is a novel tool for generating multiple alignments of protein
sequences. Using a combination of probabilistic modeling and consistency-based
alignment techniques, PROBCONS has achieved the highest accuracies of all
alignment methods to date.
Citation:
Do, C.B., Mahabhashyam, M.S.P., Brudno, M., and Batzoglou, S. 2005.
PROBCONS: Probabilistic Consistency-based Multiple Sequence Alignment.
Genome Research 15: 330-340.

Alternatives

Package Version Architecture Repository
probcons - - -

Requires

Name Value
libc.so.6(GLIBC_2.14)(64bit) -
libgcc_s.so.1()(64bit) -
libgcc_s.so.1(GCC_3.0)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -
libstdc++.so.6()(64bit) -
libstdc++.so.6(CXXABI_1.3)(64bit) -
libstdc++.so.6(CXXABI_1.3.8)(64bit) -
libstdc++.so.6(CXXABI_1.3.9)(64bit) -
libstdc++.so.6(GLIBCXX_3.4)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.11)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.20)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.21)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.9)(64bit) -

Provides

Name Value
probcons = 1.12-lp150.3.10
probcons(x86-64) = 1.12-lp150.3.10

Download

Type URL
Mirror widehat.opensuse.org
Binary Package probcons-1.12-lp150.3.10.x86_64.rpm
Source Package probcons-1.12-lp150.3.10.src.rpm

Install Howto

  1. Add the Science repository:
    # zypper addrepo http://widehat.opensuse.org/opensuse/repositories/science/openSUSE_Leap_15.0/ science
  2. Install probcons rpm package:
    # zypper install probcons

Files

Path
/usr/bin/compare-probcons
/usr/bin/makegnuplot
/usr/bin/probcons
/usr/bin/project
/usr/share/doc/packages/probcons/README

Changelog

2012-09-02 - scorot@free.fr
- fix build with recent gcc with patch1 from debian
2011-04-24 - Vimalkumar Velayudhan <vimalkumar_v@bioinformatics.org> 1.12-2
- Minor changes to spec file
2009-12-18 - vimalkumar_v@bioinformatics.org
- Initial package created

See Also

Package Description
pronsole-2.0.0~rc5.1522069560.e0ee40a-lp150.14.1.noarch.rpm CLI interface for RepRap
pronterface-2.0.0~rc5.1522069560.e0ee40a-lp150.14.1.noarch.rpm GUI interface for RepRap
ptscotch-mpich-6.0.6-lp150.10.1.x86_64.rpm Graph, mesh and hypergraph partitioning library
ptscotch-mpich-devel-6.0.6-lp150.10.1.x86_64.rpm Development libraries for scotch
ptscotch-mpich-devel-static-6.0.6-lp150.10.1.x86_64.rpm Development libraries for scotch
ptscotch-mvapich2-6.0.6-lp150.10.1.x86_64.rpm Graph, mesh and hypergraph partitioning library
ptscotch-mvapich2-devel-6.0.6-lp150.10.1.x86_64.rpm Development libraries for scotch
ptscotch-mvapich2-devel-static-6.0.6-lp150.10.1.x86_64.rpm Development libraries for scotch
ptscotch-openmpi-6.0.6-lp150.10.1.x86_64.rpm Graph, mesh and hypergraph partitioning library
ptscotch-openmpi-devel-6.0.6-lp150.10.1.x86_64.rpm Development libraries for scotch
ptscotch-openmpi-devel-static-6.0.6-lp150.10.1.x86_64.rpm Development libraries for scotch
ptscotch-openmpi2-6.0.6-lp150.10.1.x86_64.rpm Graph, mesh and hypergraph partitioning library
ptscotch-openmpi2-devel-6.0.6-lp150.10.1.x86_64.rpm Development libraries for scotch
ptscotch-openmpi2-devel-static-6.0.6-lp150.10.1.x86_64.rpm Development libraries for scotch
ptscotch-parmetis-mpich-devel-6.0.6-lp150.10.1.x86_64.rpm Development libraries for scotch
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